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Eukaryotic mRNA Sequencing without Reference Genome

FAQ

  • How to decide a species owing a reference genome or without a reference genome?


    For eukaryotes, RNA-seq with or without reference genome is applied to different analysis workflow. Generally, Ensembl（) and NCBI（） are recommended for checking the reference genome of a species. But there are also some special databases for specific species such as CuGenDB, JGI, GDR etc.